STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ70761.1Integral membrane protein. (112 aa)    
Predicted Functional Partners:
SEQ70783.1
DNA-binding transcriptional regulator, MarR family.
       0.811
SEQ70813.1
Integral membrane protein.
 
     0.783
SEP67101.1
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.750
SEQ70801.1
Uncharacterized protein, MTH1187 family.
       0.744
SEP67203.1
Ubiquinol-cytochrome c reductase cytochrome c subunit.
  
     0.731
SEQ70831.1
Uncharacterized conserved protein, AIM24 family.
       0.706
SEQ70848.1
Uncharacterized conserved protein, AIM24 family.
       0.706
SEQ70862.1
Biogenesis AIM24.
       0.706
SEQ50076.1
Cytochrome c biogenesis protein.
  
     0.704
SEQ70880.1
DNA-binding transcriptional regulator, MarR family.
       0.683
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.