Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP62746.1 | coaA | SAMN05216481_101486 | SAMN05216481_109179 | Flavoprotein. | Pantothenate kinase. | 0.412 |
SEP62746.1 | coaD | SAMN05216481_101486 | SAMN05216481_11425 | Flavoprotein. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.821 |
SEP62746.1 | coaE | SAMN05216481_101486 | SAMN05216481_101820 | Flavoprotein. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.554 |
SEP62746.1 | coaX | SAMN05216481_101486 | SAMN05216481_103532 | Flavoprotein. | Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.833 |
SEP91122.1 | coaA | SAMN05216481_102527 | SAMN05216481_109179 | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Pantothenate kinase. | 0.933 |
SEP91122.1 | coaD | SAMN05216481_102527 | SAMN05216481_11425 | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.971 |
SEP91122.1 | coaE | SAMN05216481_102527 | SAMN05216481_101820 | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.625 |
SEP91122.1 | coaX | SAMN05216481_102527 | SAMN05216481_103532 | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.925 |
SEQ52968.1 | coaA | SAMN05216481_109184 | SAMN05216481_109179 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Pantothenate kinase. | 0.475 |
SEQ52968.1 | coaD | SAMN05216481_109184 | SAMN05216481_11425 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.735 |
SEQ73651.1 | SEQ73679.1 | SAMN05216481_11422 | SAMN05216481_11423 | Hypothetical protein. | ATP-dependent DNA helicase RecG. | 0.945 |
SEQ73651.1 | SEQ73691.1 | SAMN05216481_11422 | SAMN05216481_11424 | Hypothetical protein. | 16S rRNA (guanine966-N2)-methyltransferase. | 0.766 |
SEQ73651.1 | coaD | SAMN05216481_11422 | SAMN05216481_11425 | Hypothetical protein. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.774 |
SEQ73679.1 | SEQ73651.1 | SAMN05216481_11423 | SAMN05216481_11422 | ATP-dependent DNA helicase RecG. | Hypothetical protein. | 0.945 |
SEQ73679.1 | SEQ73691.1 | SAMN05216481_11423 | SAMN05216481_11424 | ATP-dependent DNA helicase RecG. | 16S rRNA (guanine966-N2)-methyltransferase. | 0.772 |
SEQ73679.1 | coaD | SAMN05216481_11423 | SAMN05216481_11425 | ATP-dependent DNA helicase RecG. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.772 |
SEQ73691.1 | SEQ73651.1 | SAMN05216481_11424 | SAMN05216481_11422 | 16S rRNA (guanine966-N2)-methyltransferase. | Hypothetical protein. | 0.766 |
SEQ73691.1 | SEQ73679.1 | SAMN05216481_11424 | SAMN05216481_11423 | 16S rRNA (guanine966-N2)-methyltransferase. | ATP-dependent DNA helicase RecG. | 0.772 |
SEQ73691.1 | coaD | SAMN05216481_11424 | SAMN05216481_11425 | 16S rRNA (guanine966-N2)-methyltransferase. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.989 |
coaA | SEP62746.1 | SAMN05216481_109179 | SAMN05216481_101486 | Pantothenate kinase. | Flavoprotein. | 0.412 |
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