Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP61305.1 | SEQ77972.1 | SAMN05216481_101409 | SAMN05216481_11561 | Predicted oxidoreductase. | Pyridoxamine 5'-phosphate oxidase. | 0.595 |
SEP61305.1 | argH | SAMN05216481_101409 | SAMN05216481_11563 | Predicted oxidoreductase. | Argininosuccinate lyase. | 0.595 |
SEQ77953.1 | SEQ77972.1 | SAMN05216481_11560 | SAMN05216481_11561 | L-amino acid N-acyltransferase YncA. | Pyridoxamine 5'-phosphate oxidase. | 0.608 |
SEQ77972.1 | SEP61305.1 | SAMN05216481_11561 | SAMN05216481_101409 | Pyridoxamine 5'-phosphate oxidase. | Predicted oxidoreductase. | 0.595 |
SEQ77972.1 | SEQ77953.1 | SAMN05216481_11561 | SAMN05216481_11560 | Pyridoxamine 5'-phosphate oxidase. | L-amino acid N-acyltransferase YncA. | 0.608 |
SEQ77972.1 | SEQ84246.1 | SAMN05216481_11561 | SAMN05216481_11714 | Pyridoxamine 5'-phosphate oxidase. | CHAT domain-containing protein. | 0.548 |
SEQ77972.1 | SEQ84438.1 | SAMN05216481_11561 | SAMN05216481_11724 | Pyridoxamine 5'-phosphate oxidase. | CHAT domain-containing protein. | 0.509 |
SEQ77972.1 | SEQ90916.1 | SAMN05216481_11561 | SAMN05216481_11985 | Pyridoxamine 5'-phosphate oxidase. | Hypothetical protein. | 0.595 |
SEQ77972.1 | argG-2 | SAMN05216481_11561 | SAMN05216481_11562 | Pyridoxamine 5'-phosphate oxidase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.438 |
SEQ77972.1 | argH | SAMN05216481_11561 | SAMN05216481_11563 | Pyridoxamine 5'-phosphate oxidase. | Argininosuccinate lyase. | 0.682 |
SEQ77972.1 | ribBA | SAMN05216481_11561 | SAMN05216481_102496 | Pyridoxamine 5'-phosphate oxidase. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.519 |
SEQ84246.1 | SEQ77972.1 | SAMN05216481_11714 | SAMN05216481_11561 | CHAT domain-containing protein. | Pyridoxamine 5'-phosphate oxidase. | 0.548 |
SEQ84438.1 | SEQ77972.1 | SAMN05216481_11724 | SAMN05216481_11561 | CHAT domain-containing protein. | Pyridoxamine 5'-phosphate oxidase. | 0.509 |
SEQ90916.1 | SEQ77972.1 | SAMN05216481_11985 | SAMN05216481_11561 | Hypothetical protein. | Pyridoxamine 5'-phosphate oxidase. | 0.595 |
argG-2 | SEQ77972.1 | SAMN05216481_11562 | SAMN05216481_11561 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Pyridoxamine 5'-phosphate oxidase. | 0.438 |
argG-2 | argH | SAMN05216481_11562 | SAMN05216481_11563 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Argininosuccinate lyase. | 0.996 |
argH | SEP61305.1 | SAMN05216481_11563 | SAMN05216481_101409 | Argininosuccinate lyase. | Predicted oxidoreductase. | 0.595 |
argH | SEQ77972.1 | SAMN05216481_11563 | SAMN05216481_11561 | Argininosuccinate lyase. | Pyridoxamine 5'-phosphate oxidase. | 0.682 |
argH | argG-2 | SAMN05216481_11563 | SAMN05216481_11562 | Argininosuccinate lyase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.996 |
ribBA | SEQ77972.1 | SAMN05216481_102496 | SAMN05216481_11561 | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | Pyridoxamine 5'-phosphate oxidase. | 0.519 |