STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ82787.1Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. (602 aa)    
Predicted Functional Partners:
SEQ70257.1
EF-hand domain pair.
    
   0.885
SEQ82761.1
Lactonase.
 
 
  0.875
SEP65992.1
Acetyl esterase/lipase.
 
 0.840
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.838
SEQ55941.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
  
 
0.837
SEQ11055.1
Acetyl esterase/lipase.
 
 0.760
SEQ27750.1
D-alanyl-D-alanine carboxypeptidase.
  
  
  0.672
SEQ40657.1
2,4-dienoyl-CoA reductase (NADPH2).
     
 0.668
SEQ31885.1
D-alanyl-D-alanine carboxypeptidase.
  
  
  0.667
SEQ84544.1
Tryptophan 2,3-dioxygenase.
  
 
 0.652
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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