STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ80683.1Amino acid ABC transporter ATP-binding protein, PAAT family. (261 aa)    
Predicted Functional Partners:
SEQ80627.1
Glutamate transport system permease protein.
 
 0.999
SEQ80649.1
Glutamate transport system permease protein.
 
 0.999
SEQ80664.1
Glutamate transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.997
SEQ64048.1
Polar amino acid transport system permease protein.
  0.979
SEP56244.1
Polar amino acid transport system permease protein.
  0.967
SEP56252.1
Polar amino acid transport system permease protein.
  0.954
SEQ64035.1
Polar amino acid transport system substrate-binding protein.
 
 0.867
SEQ69637.1
Polar amino acid transport system substrate-binding protein.
 
 0.862
SEQ27467.1
ATP-binding cassette, subfamily B.
 
    
0.809
SEQ80706.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
    0.760
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.