STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ84768.1crotonyl-CoA carboxylase/reductase. (411 aa)    
Predicted Functional Partners:
SEQ71023.1
methylmalonyl-CoA epimerase /ethylmalonyl-CoA epimerase.
    
 0.889
SEQ84786.1
Acyl transferase domain-containing protein.
  
 0.875
SEQ84808.1
Amino acid adenylation domain-containing protein.
  
 
 0.873
SEQ43939.1
(2R)-ethylmalonyl-CoA mutase.
 
   
 0.827
SEQ33328.1
PfaB family protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.782
SEQ85806.1
Amino acid adenylation domain-containing protein.
  
 
 0.775
SEQ45109.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.774
SEP83845.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.771
SEQ05558.1
Phosphopantetheine attachment site.
  
 0.749
SEQ33366.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 0.730
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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