STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ85749.13-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase. (326 aa)    
Predicted Functional Partners:
SEQ94622.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
 
 
 0.993
SEP61265.1
[acyl-carrier-protein] S-malonyltransferase.
 
 
 0.992
SEQ85685.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  0.950
SER00595.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  0.929
SER00579.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  0.920
SEQ13447.1
Minimal PKS ketosynthase (KS/KS alpha); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  0.918
SEQ13464.1
Minimal PKS chain-length factor (CLF/KS beta); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  0.915
SEQ85696.1
Acyl carrier protein.
  
  0.914
SEQ05707.1
Act minimal PKS ketosynthase (KS/KS alpha); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  0.911
SEQ05721.1
Act minimal PKS chain-length factor (CLF/KS beta); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  0.907
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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