Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ02170.1 | SEQ02218.1 | SAMN05216481_103314 | SAMN05216481_103316 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Protein of unknown function. | 0.786 |
SEQ02170.1 | SEQ92514.1 | SAMN05216481_103314 | SAMN05216481_12035 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Hypothetical protein. | 0.595 |
SEQ02170.1 | recR | SAMN05216481_103314 | SAMN05216481_103315 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.988 |
SEQ02218.1 | SEQ02170.1 | SAMN05216481_103316 | SAMN05216481_103314 | Protein of unknown function. | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.786 |
SEQ02218.1 | SEQ92514.1 | SAMN05216481_103316 | SAMN05216481_12035 | Protein of unknown function. | Hypothetical protein. | 0.595 |
SEQ02218.1 | recR | SAMN05216481_103316 | SAMN05216481_103315 | Protein of unknown function. | DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.866 |
SEQ92514.1 | SEQ02170.1 | SAMN05216481_12035 | SAMN05216481_103314 | Hypothetical protein. | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.595 |
SEQ92514.1 | SEQ02218.1 | SAMN05216481_12035 | SAMN05216481_103316 | Hypothetical protein. | Protein of unknown function. | 0.595 |
SEQ92514.1 | purD | SAMN05216481_12035 | SAMN05216481_12036 | Hypothetical protein. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.722 |
SEQ92514.1 | recR | SAMN05216481_12035 | SAMN05216481_103315 | Hypothetical protein. | DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.595 |
purD | SEQ92514.1 | SAMN05216481_12036 | SAMN05216481_12035 | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | Hypothetical protein. | 0.722 |
recR | SEQ02170.1 | SAMN05216481_103315 | SAMN05216481_103314 | DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.988 |
recR | SEQ02218.1 | SAMN05216481_103315 | SAMN05216481_103316 | DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | Protein of unknown function. | 0.866 |
recR | SEQ92514.1 | SAMN05216481_103315 | SAMN05216481_12035 | DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | Hypothetical protein. | 0.595 |