STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ99729.1Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (355 aa)    
Predicted Functional Partners:
SEQ99738.1
Ribose transport system substrate-binding protein.
 
 0.998
SEQ99704.1
Ribose transport system ATP-binding protein.
 0.996
SEP83998.1
Ribose transport system ATP-binding protein.
 0.983
SEP61078.1
Putative multiple sugar transport system ATP-binding protein.
 0.982
SEP84018.1
Simple sugar transport system substrate-binding protein/ribose transport system substrate-binding protein.
 0.972
SEQ46516.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 0.972
SEQ44591.1
Simple sugar transport system ATP-binding protein.
 0.953
SEP83972.1
Simple sugar transport system permease protein/D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.937
SEQ44629.1
Simple sugar transport system substrate-binding protein.
 
 0.914
SEP84038.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.912
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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