Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP61265.1 | SEQ05519.1 | SAMN05216481_101407 | SAMN05216481_103477 | [acyl-carrier-protein] S-malonyltransferase. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.952 |
SEP61265.1 | SEQ50552.1 | SAMN05216481_101407 | SAMN05216481_10956 | [acyl-carrier-protein] S-malonyltransferase. | NADH-quinone oxidoreductase subunit E. | 0.589 |
SEP61265.1 | SER00503.1 | SAMN05216481_101407 | SAMN05216481_12610 | [acyl-carrier-protein] S-malonyltransferase. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 0.994 |
SEP61265.1 | SER00521.1 | SAMN05216481_101407 | SAMN05216481_12611 | [acyl-carrier-protein] S-malonyltransferase. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 0.990 |
SEP61265.1 | SER00533.1 | SAMN05216481_101407 | SAMN05216481_12612 | [acyl-carrier-protein] S-malonyltransferase. | Acyl carrier protein. | 0.993 |
SEP61265.1 | SER00609.1 | SAMN05216481_101407 | SAMN05216481_12617 | [acyl-carrier-protein] S-malonyltransferase. | Acyl carrier protein. | 0.993 |
SEP61265.1 | rplU | SAMN05216481_101407 | SAMN05216481_101283 | [acyl-carrier-protein] S-malonyltransferase. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.830 |
SEQ05519.1 | SEP61265.1 | SAMN05216481_103477 | SAMN05216481_101407 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | [acyl-carrier-protein] S-malonyltransferase. | 0.952 |
SEQ05519.1 | SEQ50552.1 | SAMN05216481_103477 | SAMN05216481_10956 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | NADH-quinone oxidoreductase subunit E. | 0.506 |
SEQ05519.1 | SER00533.1 | SAMN05216481_103477 | SAMN05216481_12612 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Acyl carrier protein. | 0.981 |
SEQ05519.1 | SER00609.1 | SAMN05216481_103477 | SAMN05216481_12617 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Acyl carrier protein. | 0.981 |
SEQ05519.1 | rplU | SAMN05216481_103477 | SAMN05216481_101283 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.899 |
SEQ50552.1 | SEP61265.1 | SAMN05216481_10956 | SAMN05216481_101407 | NADH-quinone oxidoreductase subunit E. | [acyl-carrier-protein] S-malonyltransferase. | 0.589 |
SEQ50552.1 | SEQ05519.1 | SAMN05216481_10956 | SAMN05216481_103477 | NADH-quinone oxidoreductase subunit E. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.506 |
SEQ50552.1 | SEQ51045.1 | SAMN05216481_10956 | SAMN05216481_10982 | NADH-quinone oxidoreductase subunit E. | NADH:ubiquinone oxidoreductase subunit (chain C). | 0.998 |
SEQ50552.1 | SER00533.1 | SAMN05216481_10956 | SAMN05216481_12612 | NADH-quinone oxidoreductase subunit E. | Acyl carrier protein. | 0.944 |
SEQ50552.1 | SER00609.1 | SAMN05216481_10956 | SAMN05216481_12617 | NADH-quinone oxidoreductase subunit E. | Acyl carrier protein. | 0.944 |
SEQ50552.1 | nuoB | SAMN05216481_10956 | SAMN05216481_10953 | NADH-quinone oxidoreductase subunit E. | NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.999 |
SEQ50552.1 | nuoC | SAMN05216481_10956 | SAMN05216481_10954 | NADH-quinone oxidoreductase subunit E. | NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. | 0.999 |
SEQ51045.1 | SEQ50552.1 | SAMN05216481_10982 | SAMN05216481_10956 | NADH:ubiquinone oxidoreductase subunit (chain C). | NADH-quinone oxidoreductase subunit E. | 0.998 |
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