STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER02661.1Thioredoxin reductase (NADPH)/alkyl hydroperoxide reductase subunit F. (307 aa)    
Predicted Functional Partners:
SER00995.1
Signal transduction histidine kinase.
  
 0.998
SEP99233.1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.960
SEQ32598.1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.954
SEQ85449.1
Thioredoxin 1.
  
 0.954
SEQ70693.1
Putative thioredoxin.
  
 0.950
SEQ61316.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
 
 0.933
SEQ32148.1
PAS domain S-box-containing protein.
  
 0.926
SEQ98741.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.893
SEP86528.1
DNA-binding transcriptional regulator, LacI/PurR family.
 
 0.861
SEP69698.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.852
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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