STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER03577.1Hypothetical protein. (140 aa)    
Predicted Functional Partners:
SER03585.1
Protein of unknown function.
 
  
 0.959
SER03556.1
Signal transduction histidine kinase.
 
   
 0.958
SER03606.1
Hypothetical protein.
 
 
 0.957
SEQ71993.1
Hypothetical protein.
 
 
 0.933
SEP65848.1
Signal recognition particle receptor subunit beta, a GTPase.
 
 
 0.928
SEP82831.1
Signal recognition particle receptor subunit beta, a GTPase.
 
 
 0.928
SEQ31771.1
Signal recognition particle receptor subunit beta, a GTPase.
 
 
 0.916
SEQ02733.1
Signal recognition particle receptor subunit beta, a GTPase.
 
   0.915
SEQ15376.1
Hypothetical protein.
 
   0.915
SEQ17456.1
Signal recognition particle receptor subunit beta, a GTPase.
  
   0.911
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.