STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amjMembrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (271 aa)    
Predicted Functional Partners:
AIF45538.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.679
AIF42896.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.522
AIF45285.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.504
AIF42661.1
Spore germination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.486
AIF42925.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.466
AIF42869.1
Ion channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.460
AIF45170.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.442
AIF42466.1
Transcriptional activator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.435
AIF44817.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.425
AIF45241.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.423
Your Current Organism:
Virgibacillus sp. SK37
NCBI taxonomy Id: 403957
Other names: V. sp. SK37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.