STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF43628.1Peptidase M14; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)    
Predicted Functional Partners:
AIF43549.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.577
AIF43629.1
4Fe-4S ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.505
AIF43617.1
Endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.496
AIF43550.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.480
AIF44075.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.468
AIF44009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
AIF45454.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.456
AIF42552.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.453
aprX
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
 
 0.439
AIF45012.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.422
Your Current Organism:
Virgibacillus sp. SK37
NCBI taxonomy Id: 403957
Other names: V. sp. SK37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.