Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIF41995.1 | AIF42825.1 | X953_00375 | X953_05895 | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | Spore germination protein GerKA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| AIF41995.1 | AIF43148.1 | X953_00375 | X953_08265 | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | Spore germination protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| AIF41995.1 | AIF43523.1 | X953_00375 | X953_10615 | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein AF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.762 |
| AIF41995.1 | AIF43838.1 | X953_00375 | X953_12345 | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.779 |
| AIF41995.1 | AIF43933.1 | X953_00375 | X953_12880 | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.771 |
| AIF41995.1 | AIF43934.1 | X953_00375 | X953_12885 | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | SpoVAD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.805 |
| AIF41995.1 | AIF43935.1 | X953_00375 | X953_12890 | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.777 |
| AIF41995.1 | gpr | X953_00375 | X953_09565 | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | Germination protein; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.787 |
| AIF41995.1 | spoIIAB | X953_00375 | X953_10595 | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.809 |
| AIF42825.1 | AIF41995.1 | X953_05895 | X953_00375 | Spore germination protein GerKA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| AIF42825.1 | AIF43838.1 | X953_05895 | X953_12345 | Spore germination protein GerKA; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.772 |
| AIF42825.1 | AIF43933.1 | X953_05895 | X953_12880 | Spore germination protein GerKA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.787 |
| AIF42825.1 | AIF43934.1 | X953_05895 | X953_12885 | Spore germination protein GerKA; Derived by automated computational analysis using gene prediction method: Protein Homology. | SpoVAD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.790 |
| AIF42825.1 | AIF43935.1 | X953_05895 | X953_12890 | Spore germination protein GerKA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.778 |
| AIF42825.1 | AIF43937.1 | X953_05895 | X953_12900 | Spore germination protein GerKA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
| AIF42825.1 | gpr | X953_05895 | X953_09565 | Spore germination protein GerKA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Germination protein; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.777 |
| AIF42825.1 | spoIIAB | X953_05895 | X953_10595 | Spore germination protein GerKA; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.750 |
| AIF43148.1 | AIF41995.1 | X953_08265 | X953_00375 | Spore germination protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| AIF43148.1 | AIF43838.1 | X953_08265 | X953_12345 | Spore germination protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.772 |
| AIF43148.1 | AIF43933.1 | X953_08265 | X953_12880 | Spore germination protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.788 |
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