STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF44607.1Teichoic acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)    
Predicted Functional Partners:
tagH
Teichoic acid ABC transporter ATP-binding protein; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
 
 0.999
AIF44615.1
Teichoic acid biosynthesis protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.836
AIF44613.1
Teichoic acid biosynthesis protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.835
AIF44608.1
Ribitolphosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.822
AIF45596.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.686
AIF42763.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.667
AIF44229.1
Stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.
  
    0.504
AIF44612.1
Glycerol-3-phosphate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.475
AIF44614.1
Nucleotidyltransferase; Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.475
AIF44787.1
Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
   
    0.469
Your Current Organism:
Virgibacillus sp. SK37
NCBI taxonomy Id: 403957
Other names: V. sp. SK37
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