Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Gbem_0806Membrane protein, putative. (290 aa)    
Predicted Functional Partners:
cbcA
Menaquinol oxidoreductase complex Cbc5, cytochrome c subunit, putative; 7 heme-binding sites.
  
     0.700
Gbem_2427
Cytochrome c; 12 heme-binding sites.
  
     0.659
Gbem_1152
Cytochrome c; 29 heme-binding sites.
  
     0.590
ppcB
Cytochrome c; 3 heme-binding sites.
  
     0.586
Gbem_0903
Phasin superfamily protein.
  
     0.583
Gbem_3057
Cytochrome c; 27 heme-binding sites.
  
     0.577
frx-6
Ferredoxin.
  
     0.574
Gbem_3379
Lipoprotein cytochrome c; 12 heme-binding sites.
  
     0.573
Gbem_1523
Sensor histidine kinase, HAMP domain-containing; Domains: HAMP, HisKA, HATPase_c.
  
     0.570
Gbem_2888
Cytochrome c; 27 heme-binding sites.
  
     0.550
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
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