Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mcp40H-7Methyl-accepting chemotaxis sensory transducer, class 40H. (532 aa)    
Predicted Functional Partners:
cheAY40H-1
Sensor histidine kinase CheA and response receiver CheY associated with MCPs of class 40H.
 
 0.965
cheAY40H-2
Sensor histidine kinase CheA and response receiver CheY associated with MCPs of class 40H.
 
 0.964
cheA44H
Sensor histidine kinase CheA associated with MCPs of class 44H.
 
 0.951
cheA40H
Sensor histidine kinase CheA associated with MCPs of class 40H.
 
 0.951
cheA64H
Sensor histidine kinase CheA associated with MCPs of classes 40H and 40+24H.
 
 0.951
cheA36H
Sensor histidine kinase CheA associated with MCPs of class 36H.
 
 0.948
cheA34H-2
Sensor histidine kinase CheA associated with MCPs of class 34H.
 
 0.948
cheA34H-1
Sensor histidine kinase CheA associated with MCPs of class 34H.
 
 0.947
cheW64H-2
Scaffold protein CheW associated with MCPs of classes 40H and 40+24H.
 
 0.935
cheW40H-2
Scaffold protein CheW associated with MCPs of class 40H.
 
 0.934
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
Server load: low (14%) [HD]