STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bamQ6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. (357 aa)    
Predicted Functional Partners:
bamR
cyclohexa-1,5-dienecarbonyl-CoA hydratase.
 
 
 0.991
bamA
6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase.
 
 
 0.980
bamC-2
Iron-sulfur cluster-binding oxidoreductase, putative benzoyl-CoA reductase electron transfer protein.
  
   
 0.768
bamC-1
Iron-sulfur cluster-binding oxidoreductase, putative benzoyl-CoA reductase electron transfer protein.
  
   
 0.767
bamB-1
benzoyl-CoA reductase, putative.
  
   
 0.751
Gbem_1413
(R)-2-hydroxyacyl-CoA dehydratase.
 
     0.743
bamB-2
benzoyl-CoA reductase, putative.
  
   
 0.741
Gbem_1441
Acetyltransferase, putative.
  
     0.725
gcdA
glutaconyl-CoA decarboxylase.
  
     0.679
fabG-3
3-oxoacyl-(acyl carrier protein) reductase.
 
 
 
 0.657
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.