Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
glkGlucose 6-kinase; Belongs to the bacterial glucokinase family. (327 aa)    
Predicted Functional Partners:
Gbem_1326
ROK domain transcriptional regulator/sugar kinase.
    
 0.966
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.931
tal-2
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
    
 0.900
tkt
Transketolase; Belongs to the transketolase family.
    
 0.866
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
    
 0.846
Gbem_1007
Ketose-1,6-bisphosphate aldolase, class II, putative.
     
 0.844
Gbem_1707
Aldehyde dehydrogenase family 11 protein.
     
 0.820
tklA
Transketolase, A protein.
     
  0.800
tklB
Transketolase, B protein.
     
  0.800
Gbem_3609
Glycerate 2-kinase.
     
  0.800
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
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