STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugdUDP-glucose 6-dehydrogenase. (450 aa)    
Predicted Functional Partners:
uxs
UDP-glucuronate decarboxylase.
 0.993
uge
UDP-galacturonate 4-epimerase.
 0.973
galU
Glucose-1-phosphate uridylyltransferase.
  
 0.970
arnA
UDP-glucuronate 4-dehydrogenase, decarboxylating.
 0.962
wbjC
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase; UDP-2-acetamido-2, 6-dideoxy-beta-L-arabino-4-hexulose 3-epimerase and UDP-2-acetamido-2,6-dideoxy-beta-L-lyxo-4-hexulose 4-reductase.
  
 
 0.961
galE
UDP-glucose/UDP-N-acetylglucosamine 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.937
rmlA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.928
glf
UDP-galactopyranose mutase.
  
  
 0.911
fdtC/fdtA
dTDP-3-amino-3,6-dideoxy-D-galactose N-acetyltransferase and dTDP-6-deoxy-D-hex-4-ulose isomerase.
  
  
 0.891
tyv
CDP-paratose 2-epimerase.
  
  
 0.858
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.