STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gbem_2454[acyl-]glycerolphosphate acyltransferase. (217 aa)    
Predicted Functional Partners:
plsY
Acyl-phosphate--glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
  
 
 0.920
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
 
 0.914
Gbem_0999
Diacylglycerol kinase-like protein.
    
 0.906
Gbem_3974
[acyl-]glycerolphosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 
0.900
gpsA
Glycerol-3-phosphate dehydrogenase, NAD(P)-dependent; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.831
glpA
Glycerol-3-phosphate dehydrogenase, FAD-dependent; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.827
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.787
Gbem_2451
HAD superfamily hydrolase.
  
    0.692
Gbem_2452
HNH endonuclease family protein.
       0.682
Gbem_2450
TPR domain protein.
       0.648
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.