Gbem_2554 protein (Geobacter bemidjiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

Gbem_2554

Hypothetical protein. (1131 aa)

Predicted Functional Partners:

Gbem_2553

0.992

Gbem_2549

0.989

Gbem_2552

0.989

Gbem_2545

0.976

Gbem_2546

0.972

Gbem_2547

0.972

Gbem_2555

0.961

Gbem_2551

0.948

Gbem_2548

0.925

Gbem_2550

0.913

Your Current Organism:

Geobacter bemidjiensis

NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Gbem_2545	Gbem_2546	Phage tail sheath protein, putative.	Phage tail tube protein gp19, putative.	0.989
Gbem_2545	Gbem_2547	Phage tail sheath protein, putative.	Phage tail tube protein gp19, putative.	0.988
Gbem_2545	Gbem_2548	Phage tail sheath protein, putative.	Hypothetical protein.	0.883
Gbem_2545	Gbem_2549	Phage tail sheath protein, putative.	Hypothetical protein.	0.981
Gbem_2545	Gbem_2550	Phage tail sheath protein, putative.	Phage protein D and tail spike protein, putative.	0.887
Gbem_2545	Gbem_2551	Phage tail sheath protein, putative.	PAAR repeat-containing protein.	0.863
Gbem_2545	Gbem_2552	Phage tail sheath protein, putative.	Phage baseplate outer wedge protein (acidic lysozyme), putative.	0.995
Gbem_2545	Gbem_2553	Phage tail sheath protein, putative.	Hypothetical protein.	0.986
Gbem_2545	Gbem_2554	Phage tail sheath protein, putative.	Hypothetical protein.	0.976
Gbem_2545	Gbem_2555	Phage tail sheath protein, putative.	Hypothetical protein.	0.887
Gbem_2546	Gbem_2545	Phage tail tube protein gp19, putative.	Phage tail sheath protein, putative.	0.989
Gbem_2546	Gbem_2547	Phage tail tube protein gp19, putative.	Phage tail tube protein gp19, putative.	0.962
Gbem_2546	Gbem_2548	Phage tail tube protein gp19, putative.	Hypothetical protein.	0.875
Gbem_2546	Gbem_2549	Phage tail tube protein gp19, putative.	Hypothetical protein.	0.967
Gbem_2546	Gbem_2550	Phage tail tube protein gp19, putative.	Phage protein D and tail spike protein, putative.	0.919
Gbem_2546	Gbem_2551	Phage tail tube protein gp19, putative.	PAAR repeat-containing protein.	0.868
Gbem_2546	Gbem_2552	Phage tail tube protein gp19, putative.	Phage baseplate outer wedge protein (acidic lysozyme), putative.	0.972
Gbem_2546	Gbem_2553	Phage tail tube protein gp19, putative.	Hypothetical protein.	0.974
Gbem_2546	Gbem_2554	Phage tail tube protein gp19, putative.	Hypothetical protein.	0.972
Gbem_2546	Gbem_2555	Phage tail tube protein gp19, putative.	Hypothetical protein.	0.884