STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gbem_2574Glycosyltransferase. (283 aa)    
Predicted Functional Partners:
Gbem_2580
ABC transporter, ATP-binding protein.
 
  
 0.866
Gbem_2581
ABC transporter, membrane protein, ABC-2 family.
 
  
 0.850
Gbem_2573
Glycosyltransferase.
 
 
0.848
Gbem_2575
Glycosyltransferase.
 
 
 0.843
Gbem_2565
Glycosyltransferase, WcfI-like protein.
 
 
 0.825
Gbem_2582
Glycosyltransferase, WfgS-like family.
 
    
0.821
Gbem_2563
Glycosyltransferase.
 
    
0.819
Gbem_2566
SAM-dependent methyltransferase, putative.
 
     0.819
rfbE
glutamate--GDP-4-keto-6-deoxy-D-mannose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.810
Gbem_2564
SAM-dependent methyltransferase, FkbM family.
 
    0.809
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.