node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gbem_0082 | gidA | Gbem_0082 | Gbem_4057 | Thiamin biosynthesis protein ThiI-related adenine nucleotide alpha hydrolase superfamily protein. | tRNA (5-carboxymethylaminomethyl-U34)- formylglycinetransferase/reductase; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.416 |
Gbem_0082 | mnmA-1 | Gbem_0082 | Gbem_1976 | Thiamin biosynthesis protein ThiI-related adenine nucleotide alpha hydrolase superfamily protein. | tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.900 |
Gbem_0082 | mnmA-2 | Gbem_0082 | Gbem_3268 | Thiamin biosynthesis protein ThiI-related adenine nucleotide alpha hydrolase superfamily protein. | tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.900 |
Gbem_0082 | nifS | Gbem_0082 | Gbem_1569 | Thiamin biosynthesis protein ThiI-related adenine nucleotide alpha hydrolase superfamily protein. | Nitrogen fixation iron-sulfur cluster assembly cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.458 |
Gbem_0082 | pheT | Gbem_0082 | Gbem_1995 | Thiamin biosynthesis protein ThiI-related adenine nucleotide alpha hydrolase superfamily protein. | phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.505 |
Gbem_0082 | ribD | Gbem_0082 | Gbem_3024 | Thiamin biosynthesis protein ThiI-related adenine nucleotide alpha hydrolase superfamily protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.586 |
Gbem_0082 | rnpA | Gbem_0082 | Gbem_4060 | Thiamin biosynthesis protein ThiI-related adenine nucleotide alpha hydrolase superfamily protein. | Ribonuclease P, protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.476 |
Gbem_0082 | rsmB | Gbem_0082 | Gbem_3528 | Thiamin biosynthesis protein ThiI-related adenine nucleotide alpha hydrolase superfamily protein. | 16S rRNA (5-methyl-C967)-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.515 |
fmt | mnmA-1 | Gbem_0635 | Gbem_1976 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.498 |
fmt | mnmA-2 | Gbem_0635 | Gbem_3268 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.517 |
fmt | pheT | Gbem_0635 | Gbem_1995 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.609 |
fmt | rsmB | Gbem_0635 | Gbem_3528 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 16S rRNA (5-methyl-C967)-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.958 |
gidA | Gbem_0082 | Gbem_4057 | Gbem_0082 | tRNA (5-carboxymethylaminomethyl-U34)- formylglycinetransferase/reductase; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | Thiamin biosynthesis protein ThiI-related adenine nucleotide alpha hydrolase superfamily protein. | 0.416 |
gidA | mnmA-1 | Gbem_4057 | Gbem_1976 | tRNA (5-carboxymethylaminomethyl-U34)- formylglycinetransferase/reductase; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.752 |
gidA | mnmA-2 | Gbem_4057 | Gbem_3268 | tRNA (5-carboxymethylaminomethyl-U34)- formylglycinetransferase/reductase; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.756 |
gidA | mnmE | Gbem_4057 | Gbem_4058 | tRNA (5-carboxymethylaminomethyl-U34)- formylglycinetransferase/reductase; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | tRNA (5-carboxymethylaminomethyl-U34) modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.995 |
gidA | rnpA | Gbem_4057 | Gbem_4060 | tRNA (5-carboxymethylaminomethyl-U34)- formylglycinetransferase/reductase; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | Ribonuclease P, protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.793 |
gidA | rsmB | Gbem_4057 | Gbem_3528 | tRNA (5-carboxymethylaminomethyl-U34)- formylglycinetransferase/reductase; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 16S rRNA (5-methyl-C967)-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.432 |
mnmA-1 | Gbem_0082 | Gbem_1976 | Gbem_0082 | tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Thiamin biosynthesis protein ThiI-related adenine nucleotide alpha hydrolase superfamily protein. | 0.900 |
mnmA-1 | fmt | Gbem_1976 | Gbem_0635 | tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.498 |