STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gbem_3402Mannose-1-phosphate guanylyltransferase and mannose-6-phosphate isomerase-related protein. (836 aa)    
Predicted Functional Partners:
Gbem_3342
Mannose-1-phosphate guanylyltransferase; Truncated mannose-6-phosphate isomerase domain.
  
 
 0.989
wbjC
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase; UDP-2-acetamido-2, 6-dideoxy-beta-L-arabino-4-hexulose 3-epimerase and UDP-2-acetamido-2,6-dideoxy-beta-L-lyxo-4-hexulose 4-reductase.
  
 
 0.959
gmd
GDP-mannose 4,6-dehydratase and GDP-6-deoxy-D-lyxo-4-hexulose reductase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
 
 0.946
manB
Phosphomannomutase.
  
 
 0.945
Gbem_3344
Mannose-6-phosphate isomerase, putative.
  
 
 0.939
Gbem_0873
Phosphotransferase system, mannose-type, protein IIA.
    
 0.918
fdtC/fdtA
dTDP-3-amino-3,6-dideoxy-D-galactose N-acetyltransferase and dTDP-6-deoxy-D-hex-4-ulose isomerase.
  
 
 0.911
selB
Selenocysteine-specific translation elongation factor.
    
 0.901
rmlA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
0.900
rmlB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.869
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.