STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLO04559.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa)    
Predicted Functional Partners:
OLO04557.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.986
OLO04558.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.955
OLO04556.1
Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
  0.890
OLO04425.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.843
OLO04426.1
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.813
OLO04670.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.789
OLO04840.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.777
OLO03241.1
Peptide ABC transporter permease; Transports peptides consisting of two or three amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.753
OLO04560.1
Class II aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.728
OLO05504.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.723
Your Current Organism:
Salinicola socius
NCBI taxonomy Id: 404433
Other names: DSM 19940, S. socius, VKM B-2397, strain SMB35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.