STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLO04368.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)    
Predicted Functional Partners:
OLO04367.1
DUF2334 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.956
OLO04366.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.954
OLO04680.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.626
OLO03259.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.619
OLO02710.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.604
OLO04365.1
Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction.
       0.553
OLO04655.1
Nucleoid-associated protein YejK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.550
OLO05763.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.549
OLO04743.1
PA-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.541
OLO04664.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.535
Your Current Organism:
Salinicola socius
NCBI taxonomy Id: 404433
Other names: DSM 19940, S. socius, VKM B-2397, strain SMB35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.