STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLO03292.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)    
Predicted Functional Partners:
OLO03431.1
L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.632
OLO03291.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.576
OLO03293.1
Flagellar filament capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
       0.479
OLO03432.1
Flagellar export chaperone FliS; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.438
OLO03294.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.423
OLO03295.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.423
OLO03296.1
Flagellar protein FhlB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.423
queC
7-cyano-7-deazaguanine synthase QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.
       0.421
Your Current Organism:
Salinicola socius
NCBI taxonomy Id: 404433
Other names: DSM 19940, S. socius, VKM B-2397, strain SMB35
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