STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLO03330.1Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)    
Predicted Functional Partners:
OLO03329.1
Phage major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
OLO05110.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.991
OLO03339.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.991
OLO05097.1
Late control protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
OLO03324.1
Late control protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
OLO05102.1
Phage major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.975
OLO03332.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.955
OLO05108.1
Phage tail protein I; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.952
OLO03337.1
Phage tail protein I; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.952
OLO04791.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.951
Your Current Organism:
Salinicola socius
NCBI taxonomy Id: 404433
Other names: DSM 19940, S. socius, VKM B-2397, strain SMB35
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