STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLO03336.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (692 aa)    
Predicted Functional Partners:
OLO03335.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.929
OLO03337.1
Phage tail protein I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.926
OLO03338.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.924
OLO03339.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.919
OLO03340.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.915
OLO05108.1
Phage tail protein I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.688
OLO05098.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.683
OLO03325.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.683
OLO05109.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.681
OLO05103.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.679
Your Current Organism:
Salinicola socius
NCBI taxonomy Id: 404433
Other names: DSM 19940, S. socius, VKM B-2397, strain SMB35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.