STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLO02784.1Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)    
Predicted Functional Partners:
OLO03536.1
Gluconate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.718
OLO05396.1
2,5-didehydrogluconate reductase B; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.705
OLO02908.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.688
OLO03953.1
Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.537
OLO03215.1
Galactose mutarotase; Converts alpha-aldose to the beta-anomer.
   
 0.532
OLO05436.1
Pyrroloquinoline quinone-dependent dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.522
OLO03486.1
Glucose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.512
OLO02859.1
Pyrroloquinoline quinone-dependent dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.512
BTW07_17940
Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.487
OLO02685.1
NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
Your Current Organism:
Salinicola socius
NCBI taxonomy Id: 404433
Other names: DSM 19940, S. socius, VKM B-2397, strain SMB35
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