STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLO02586.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)    
Predicted Functional Partners:
OLO02647.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.522
OLO03142.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.473
OLO03173.1
Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
    
  0.442
OLO03143.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
0.439
OLO03634.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.433
OLO05278.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.429
OLO02553.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.420
OLO04237.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.412
OLO03098.1
Arylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.412
OLO02564.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.408
Your Current Organism:
Salinicola socius
NCBI taxonomy Id: 404433
Other names: DSM 19940, S. socius, VKM B-2397, strain SMB35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.