STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS28330.1Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_0417 two component, sigma54 specific, transcriptional regulator, fis family. (480 aa)    
Predicted Functional Partners:
ABS28329.1
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ade:Adeh_0418 multi-sensor signal transduction histidine kinase.
 
 
 
 0.824
ABS24960.1
TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ; PFAM: surface presentation of antigens (SPOA) protein; KEGG: ade:Adeh_0705 surface presentation of antigens (SpoA) protein.
  
  
 0.816
ABS28328.1
TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: ade:Adeh_0419 selenocysteine-specific translation elongation factor.
       0.802
ABS25175.1
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ade:Adeh_0923 multi-sensor signal transduction histidine kinase.
  
  0.758
ABS25236.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2240 periplasmic sensor signal transduction histidine kinase.
  
 
  0.739
ABS25099.1
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0834 periplasmic sensor signal transduction histidine kinase.
  
 
  0.738
ABS25225.1
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2240 periplasmic sensor signal transduction histidine kinase.
  
 
  0.737
ABS26641.1
PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_1327 response regulator receiver sensor signal transduction histidine kinase.
  
 
 
0.706
ABS28327.1
PFAM: phosphoribosyltransferase; KEGG: ade:Adeh_0420 phosphoribosyltransferase.
       0.700
ABS28490.1
RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.682
Your Current Organism:
Anaeromyxobacter sp. Fw1095
NCBI taxonomy Id: 404589
Other names: A. sp. Fw109-5, Anaeromyxobacter sp. Fw109-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.