STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS28605.1KEGG: ade:Adeh_4273 hypothetical protein. (154 aa)    
Predicted Functional Partners:
ABS28603.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ade:Adeh_4271 sigma-24 (FecI-like); Belongs to the sigma-70 factor family. ECF subfamily.
       0.781
ABS28604.1
KEGG: ade:Adeh_4272 putative transmembrane transcriptional regulator (anti-sigma factor).
       0.781
ABS28601.1
KEGG: ade:Adeh_4269 hypothetical protein.
       0.501
ABS28602.1
KEGG: ade:Adeh_4270 hypothetical protein.
       0.501
Your Current Organism:
Anaeromyxobacter sp. Fw1095
NCBI taxonomy Id: 404589
Other names: A. sp. Fw109-5, Anaeromyxobacter sp. Fw109-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.