STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIRG_01765Uncharacterized protein; Belongs to the complex I LYR family. (290 aa)    
Predicted Functional Partners:
CIRG_05024
Uncharacterized protein.
    
 0.807
CIRG_02562
MCMA protein.
    
 0.678
CIRG_08164
Uncharacterized protein.
    
 0.661
CIRG_08224
Homeobox domain-containing protein.
    
 0.661
CIRG_03810
Calcium-channel protein CCH1.
    
 0.599
CIRG_08471
Uncharacterized protein.
  
 
  0.584
CIRG_00046
GATA-type domain-containing protein.
    
 0.566
CIRG_03488
Clock-controlled protein 8.
    
 0.566
CIRG_09519
Nitrogen regulatory protein areA.
    
 0.566
CIRG_00675
GATA factor SREP.
    
 0.566
Your Current Organism:
Coccidioides immitis RMSCC2394
NCBI taxonomy Id: 404692
Other names: C. immitis RMSCC 2394, Coccidioides immitis RMSCC 2394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.