STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIRG_02844Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family. (586 aa)    
Predicted Functional Partners:
CIRG_03988
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 0.976
CIRG_07487
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.957
CIRG_00634
Vacuolar protein sorting-associated protein vps5.
    
 
0.942
CIRG_01759
Vacuolar protein sorting-associated protein 26B-B.
    
 
 0.890
CIRG_09107
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 0.724
CIRG_09603
Synaptobrevin.
    
 0.629
CIRG_00653
Lipid binding protein.
    
 
 0.626
CIRG_08902
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.616
CIRG_00411
Huntingtin-interacting protein 1.
    
  0.613
CIRG_07818
Uncharacterized protein.
    
 0.606
Your Current Organism:
Coccidioides immitis RMSCC2394
NCBI taxonomy Id: 404692
Other names: C. immitis RMSCC 2394, Coccidioides immitis RMSCC 2394
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