STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQU77318.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)    
Predicted Functional Partners:
murR
RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.774
secD
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.638
BVA24_03495
50S ribosomal protein L13; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.615
BVA24_00725
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.594
AQU77233.1
RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.571
BVA24_00090
ATPase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.521
PheT_1
phenylalanine--tRNA ligase subunit alpha; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.408
Your Current Organism:
Mycoplasma capricolum
NCBI taxonomy Id: 40480
Other names: F38 group of mycoplasmas, F38-type caprine mycoplasmas, M. capricolum subsp. capripneumoniae, Mycoplasma capricolum capripneumoniae, Mycoplasma capricolum subsp. capripneumoniae, Mycoplasma sp. JKGM01, NCTC 10192, strain F38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.