STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
limB_2Unannotated protein. (370 aa)    
Predicted Functional Partners:
ntaA_2
Unannotated protein.
 
     0.919
ntaA_1
Unannotated protein.
 
     0.842
limB_3
Unannotated protein.
 
    0.708
limB_4
Unannotated protein.
  
    0.671
GCA_002013645_00023
Unannotated protein.
       0.569
GCA_002013645_03118
Unannotated protein.
       0.539
ssuD_2
Unannotated protein.
  
    0.401
Your Current Organism:
Mycobacteroides salmoniphilum
NCBI taxonomy Id: 404941
Other names: ATCC 13758, DSM 43276, M. salmoniphilum, Mycobacterium salmoniphilum, Mycobacteroides salmoniphilum (Whipps et al. 2007) Gupta et al. 2018, strain SC
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.