STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002013645_00843Unannotated protein. (406 aa)    
Predicted Functional Partners:
deaD_1
Unannotated protein; Belongs to the DEAD box helicase family.
  
    0.877
GCA_002013645_00851
Unannotated protein.
 
     0.821
GCA_002013645_03655
Unannotated protein.
 
  
 0.786
GCA_002013645_00571
Unannotated protein.
  
     0.774
GCA_002013645_00728
Unannotated protein.
  
     0.774
GCA_002013645_00362
Unannotated protein.
  
     0.773
GCA_002013645_00005
Unannotated protein.
  
     0.772
GCA_002013645_02112
Unannotated protein.
  
     0.771
GCA_002013645_02262
Unannotated protein.
  
     0.771
GCA_002013645_02534
Unannotated protein.
  
     0.771
Your Current Organism:
Mycobacteroides salmoniphilum
NCBI taxonomy Id: 404941
Other names: ATCC 13758, DSM 43276, M. salmoniphilum, Mycobacterium salmoniphilum, Mycobacteroides salmoniphilum (Whipps et al. 2007) Gupta et al. 2018, strain SC
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.