Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FccB | GCA_002013645_02937 | GCA_002013645_02938 | GCA_002013645_02937 | Unannotated protein. | Unannotated protein. | 0.564 |
GCA_002013645_00003 | GCA_002013645_02937 | GCA_002013645_00003 | GCA_002013645_02937 | Unannotated protein. | Unannotated protein. | 0.696 |
GCA_002013645_00003 | GCA_002013645_04065 | GCA_002013645_00003 | GCA_002013645_04065 | Unannotated protein. | Unannotated protein. | 0.677 |
GCA_002013645_00003 | mca_1 | GCA_002013645_00003 | GCA_002013645_00269 | Unannotated protein. | Unannotated protein. | 0.720 |
GCA_002013645_00003 | mca_2 | GCA_002013645_00003 | GCA_002013645_02215 | Unannotated protein. | Unannotated protein; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.729 |
GCA_002013645_00003 | mshB_2 | GCA_002013645_00003 | GCA_002013645_02338 | Unannotated protein. | Unannotated protein; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.647 |
GCA_002013645_00003 | mshD_1 | GCA_002013645_00003 | GCA_002013645_01893 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.693 |
GCA_002013645_02937 | FccB | GCA_002013645_02937 | GCA_002013645_02938 | Unannotated protein. | Unannotated protein. | 0.564 |
GCA_002013645_02937 | GCA_002013645_00003 | GCA_002013645_02937 | GCA_002013645_00003 | Unannotated protein. | Unannotated protein. | 0.696 |
GCA_002013645_02937 | GCA_002013645_04065 | GCA_002013645_02937 | GCA_002013645_04065 | Unannotated protein. | Unannotated protein. | 0.511 |
GCA_002013645_02937 | arsC | GCA_002013645_02937 | GCA_002013645_02060 | Unannotated protein. | Unannotated protein; Belongs to the ArsC family. | 0.779 |
GCA_002013645_02937 | mca_1 | GCA_002013645_02937 | GCA_002013645_00269 | Unannotated protein. | Unannotated protein. | 0.781 |
GCA_002013645_02937 | mca_2 | GCA_002013645_02937 | GCA_002013645_02215 | Unannotated protein. | Unannotated protein; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.783 |
GCA_002013645_02937 | mshA | GCA_002013645_02937 | GCA_002013645_00227 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.561 |
GCA_002013645_02937 | mshB_2 | GCA_002013645_02937 | GCA_002013645_02338 | Unannotated protein. | Unannotated protein; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.753 |
GCA_002013645_02937 | mshC | GCA_002013645_02937 | GCA_002013645_03645 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.609 |
GCA_002013645_02937 | mshD_1 | GCA_002013645_02937 | GCA_002013645_01893 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.791 |
GCA_002013645_04065 | GCA_002013645_00003 | GCA_002013645_04065 | GCA_002013645_00003 | Unannotated protein. | Unannotated protein. | 0.677 |
GCA_002013645_04065 | GCA_002013645_02937 | GCA_002013645_04065 | GCA_002013645_02937 | Unannotated protein. | Unannotated protein. | 0.511 |
GCA_002013645_04065 | mca_1 | GCA_002013645_04065 | GCA_002013645_00269 | Unannotated protein. | Unannotated protein. | 0.564 |
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