STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001517935_00474Unannotated protein. (398 aa)    
Predicted Functional Partners:
GCA_001517935_00475
Unannotated protein.
  
 
 0.986
GCA_001517935_00256
Unannotated protein.
  
 
 0.950
GCA_001517935_01162
Unannotated protein.
  
 
 0.875
GCA_001517935_00473
Unannotated protein.
       0.773
GCA_001517935_00476
Unannotated protein.
  
    0.772
GCA_001517935_00478
Unannotated protein.
       0.761
GCA_001517935_00477
Unannotated protein.
       0.756
GCA_001517935_00173
Unannotated protein.
 
 
 0.750
GCA_001517935_00202
Unannotated protein.
  
 
 0.692
GCA_001517935_00479
Unannotated protein.
  
    0.669
Your Current Organism:
Sneathia sanguinegens
NCBI taxonomy Id: 40543
Other names: CCUG 41628, CIP 106906, DSM 22970, Leptotrichia sanguinegens, S. sanguinegens, Sneathia sanguinegens Collins et al. 2002
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.