STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001517935_00804Unannotated protein. (270 aa)    
Predicted Functional Partners:
GCA_001517935_00803
Unannotated protein.
 0.999
GCA_001517935_01073
Unannotated protein.
 
 0.991
GCA_001517935_00256
Unannotated protein.
     
 0.895
GCA_001517935_00205
Unannotated protein.
 
   
  0.887
GCA_001517935_00976
Unannotated protein.
  
 
 0.852
GCA_001517935_01086
Unannotated protein.
    
  0.839
GCA_001517935_00171
Unannotated protein.
    
 0.785
GCA_001517935_00166
Unannotated protein.
    
 0.784
GCA_001517935_00810
Unannotated protein.
       0.784
GCA_001517935_01166
Unannotated protein.
    
 0.784
Your Current Organism:
Sneathia sanguinegens
NCBI taxonomy Id: 40543
Other names: CCUG 41628, CIP 106906, DSM 22970, Leptotrichia sanguinegens, S. sanguinegens, Sneathia sanguinegens Collins et al. 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.