STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001517935_00906Unannotated protein. (223 aa)    
Predicted Functional Partners:
GCA_001517935_00907
Unannotated protein.
 0.996
GCA_001517935_00149
Unannotated protein.
  
 0.883
GCA_001517935_00242
Unannotated protein.
 
 
 0.846
GCA_001517935_00401
Unannotated protein.
    
 0.819
GCA_001517935_00904
Unannotated protein.
 
     0.809
GCA_001517935_00407
Unannotated protein.
  
 
 0.795
GCA_001517935_00876
Unannotated protein.
  
 0.784
GCA_001517935_00905
Unannotated protein.
      0.768
GCA_001517935_00903
Unannotated protein.
  
    0.767
GCA_001517935_00896
Unannotated protein.
    
 0.746
Your Current Organism:
Sneathia sanguinegens
NCBI taxonomy Id: 40543
Other names: CCUG 41628, CIP 106906, DSM 22970, Leptotrichia sanguinegens, S. sanguinegens, Sneathia sanguinegens Collins et al. 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.