Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY01574.1 | SDY52746.1 | SAMN05444365_101381 | SAMN05444365_102538 | Amidohydrolase. | L-glutamine synthetase. | 0.559 |
SDY01574.1 | pxpA | SAMN05444365_101381 | SAMN05444365_1011096 | Amidohydrolase. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.617 |
SDY06661.1 | SDY38178.1 | SAMN05444365_101558 | SAMN05444365_10275 | L-proline dehydrogenase. | Sensor histidine kinase inhibitor, KipI family. | 0.409 |
SDY06661.1 | SDY38203.1 | SAMN05444365_101558 | SAMN05444365_10276 | L-proline dehydrogenase. | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.438 |
SDY06661.1 | SDY70698.1 | SAMN05444365_101558 | SAMN05444365_103198 | L-proline dehydrogenase. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.983 |
SDY06661.1 | SDZ30267.1 | SAMN05444365_101558 | SAMN05444365_109152 | L-proline dehydrogenase. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.877 |
SDY06661.1 | SDZ30288.1 | SAMN05444365_101558 | SAMN05444365_109153 | L-proline dehydrogenase. | L-proline dehydrogenase. | 0.613 |
SDY06661.1 | pxpA | SAMN05444365_101558 | SAMN05444365_1011096 | L-proline dehydrogenase. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.679 |
SDY38178.1 | SDY06661.1 | SAMN05444365_10275 | SAMN05444365_101558 | Sensor histidine kinase inhibitor, KipI family. | L-proline dehydrogenase. | 0.409 |
SDY38178.1 | SDY38203.1 | SAMN05444365_10275 | SAMN05444365_10276 | Sensor histidine kinase inhibitor, KipI family. | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.999 |
SDY38178.1 | SDZ30288.1 | SAMN05444365_10275 | SAMN05444365_109153 | Sensor histidine kinase inhibitor, KipI family. | L-proline dehydrogenase. | 0.409 |
SDY38178.1 | pxpA | SAMN05444365_10275 | SAMN05444365_1011096 | Sensor histidine kinase inhibitor, KipI family. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.999 |
SDY38203.1 | SDY06661.1 | SAMN05444365_10276 | SAMN05444365_101558 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | L-proline dehydrogenase. | 0.438 |
SDY38203.1 | SDY38178.1 | SAMN05444365_10276 | SAMN05444365_10275 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | Sensor histidine kinase inhibitor, KipI family. | 0.999 |
SDY38203.1 | SDY52746.1 | SAMN05444365_10276 | SAMN05444365_102538 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | L-glutamine synthetase. | 0.648 |
SDY38203.1 | SDY70698.1 | SAMN05444365_10276 | SAMN05444365_103198 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.405 |
SDY38203.1 | SDZ05032.1 | SAMN05444365_10276 | SAMN05444365_10551 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | Glutamine synthetase. | 0.649 |
SDY38203.1 | SDZ05165.1 | SAMN05444365_10276 | SAMN05444365_10559 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | Glutamine synthetase. | 0.649 |
SDY38203.1 | SDZ30267.1 | SAMN05444365_10276 | SAMN05444365_109152 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.405 |
SDY38203.1 | SDZ30288.1 | SAMN05444365_10276 | SAMN05444365_109153 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | L-proline dehydrogenase. | 0.438 |
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