STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY23398.1Putative sterol carrier protein. (150 aa)    
Predicted Functional Partners:
SDY23369.1
acyl-CoA dehydrogenase.
 
  
  0.939
SDY23430.1
Transcriptional regulator, TetR family.
 
     0.740
SDY23332.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
       0.567
SDY72937.1
Protein of unknown function.
  
     0.527
SDY45416.1
acyl-CoA dehydrogenase.
     
 0.506
SDY20415.1
butyryl-CoA dehydrogenase.
     
  0.499
SDY21790.1
Hypothetical protein.
     
  0.499
SDY05105.1
(2S)-methylsuccinyl-CoA dehydrogenase.
     
  0.499
SDY11237.1
Acyl-CoA dehydrogenase.
     
  0.499
SDY50417.1
Acyl-CoA dehydrogenase.
     
  0.499
Your Current Organism:
Micromonospora pattaloongensis
NCBI taxonomy Id: 405436
Other names: DSM 45245, JCM 12833, M. pattaloongensis, Micromonospora pattaloongensis Thawai et al. 2008, strain TJ2-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.