STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX96016.1Hypothetical protein. (225 aa)    
Predicted Functional Partners:
SDY43362.1
HxxPF-repeated domain-containing protein.
  
 0.994
SDY98278.1
Myxalamid-type polyketide synthase MxaB.
  
 0.991
SDY98262.1
Ketoacyl-synthetase C-terminal extension; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.988
SDY43671.1
Amino acid adenylation domain-containing protein.
  
 0.787
SDY43807.1
Amino acid adenylation domain-containing protein.
  
 0.787
SDZ40369.1
[acyl-carrier-protein] S-malonyltransferase.
  
 0.709
SDY46701.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.646
SDZ42434.1
Regulatory protein, luxR family.
  
     0.556
SDX95949.1
DNA-binding transcriptional regulator, PadR family.
       0.520
SDX95983.1
Hypothetical protein.
       0.517
Your Current Organism:
Micromonospora pattaloongensis
NCBI taxonomy Id: 405436
Other names: DSM 45245, JCM 12833, M. pattaloongensis, Micromonospora pattaloongensis Thawai et al. 2008, strain TJ2-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.