STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY50224.1Amino acid ABC transporter membrane protein 2, PAAT family. (290 aa)    
Predicted Functional Partners:
SDY50130.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.999
SDY50190.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 
0.998
SDY50162.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.994
SDY93891.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.976
SDZ09429.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.976
SDZ32057.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.976
SDZ32021.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.927
SDY93848.1
Polar amino acid transport system substrate-binding protein.
 
  0.863
SDZ09393.1
Polar amino acid transport system substrate-binding protein.
 
  0.849
SDY93868.1
Polar amino acid transport system permease protein.
 
  
 
0.806
Your Current Organism:
Micromonospora pattaloongensis
NCBI taxonomy Id: 405436
Other names: DSM 45245, JCM 12833, M. pattaloongensis, Micromonospora pattaloongensis Thawai et al. 2008, strain TJ2-2
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