STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY98295.1Acyl carrier protein. (132 aa)    
Predicted Functional Partners:
SDY43362.1
HxxPF-repeated domain-containing protein.
  
 0.999
SDY43325.1
Amino acid adenylation domain-containing protein.
  
 0.992
SDZ40369.1
[acyl-carrier-protein] S-malonyltransferase.
  
 0.978
SDY43639.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.969
SDY43671.1
Amino acid adenylation domain-containing protein.
  
 0.961
SDY43807.1
Amino acid adenylation domain-containing protein.
  
 0.961
SDY94641.1
NAD(P)H dehydrogenase (quinone).
   
 0.954
SDZ36227.1
NADH dehydrogenase subunit E.
   
  0.942
rplU
LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
 
 0.919
SDZ20977.1
Cytochrome c oxidase subunit 3/cytochrome c oxidase subunit I+III.
    
   0.917
Your Current Organism:
Micromonospora pattaloongensis
NCBI taxonomy Id: 405436
Other names: DSM 45245, JCM 12833, M. pattaloongensis, Micromonospora pattaloongensis Thawai et al. 2008, strain TJ2-2
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