STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ09941.1Glyoxylase, beta-lactamase superfamily II. (209 aa)    
Predicted Functional Partners:
SDZ09956.1
S-(hydroxymethyl)mycothiol dehydrogenase.
 
     0.927
SDY43362.1
HxxPF-repeated domain-containing protein.
   
 0.755
SDZ32953.1
Glyoxylase, beta-lactamase superfamily II.
  
  
 
0.735
SDY78861.1
Adenylyltransferase and sulfurtransferase.
  
 0.690
SDY69444.1
Glyoxylase, beta-lactamase superfamily II.
  
  
 
0.672
SDZ33540.1
S-(hydroxymethyl)mycothiol dehydrogenase.
 
     0.655
SDY98278.1
Myxalamid-type polyketide synthase MxaB.
   
 0.538
SDZ09976.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
  
    0.479
SDY23062.1
Protein of unknown function.
  
     0.465
SDZ09926.1
Hypothetical protein.
       0.455
Your Current Organism:
Micromonospora pattaloongensis
NCBI taxonomy Id: 405436
Other names: DSM 45245, JCM 12833, M. pattaloongensis, Micromonospora pattaloongensis Thawai et al. 2008, strain TJ2-2
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